treeflow.evolution.substitution package
=======================================

.. automodule:: treeflow.evolution.substitution
   :members:
   :undoc-members:
   :show-inheritance:

Subpackages
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.. toctree::
   :maxdepth: 1

   treeflow.evolution.substitution.nucleotide

Submodules
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.. toctree::
   :maxdepth: 1

   treeflow.evolution.substitution.base_substitution_model
   treeflow.evolution.substitution.eigendecomposition
   treeflow.evolution.substitution.probabilities
   treeflow.evolution.substitution.util